Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891796.1_cds_XP_016446677.1_41510
CDS Infomation

[gene=LOC107771747] [db_xref=GeneID:107771747] [protein=squalene monooxygenase-like] [protein_id=XP_016446677.1] [location=complement(join(60551..60661,60760..61038,61380..61655,61764..61982,62188..62356,62611..62785,63268..63379,63780..64031))] [gbkey=CDS]
Sequence

ATGGTGGATATGGGTCTTTCCGGATCTGTACTTGCGGTGGTGTTTGGCTTCGTGGCAGTT
TTGTGGTTTTTCATTCAGAGAAACGGTGGCCGCAAAGATAAAAATAATGACCCCGCCACC
GCCACCACCAGCACCACTACAACAACGGTGTATGATGGAGAATGCAGATCAAAGGATGCA
AACGACAACGCTGACATCATCATCGTCGGTGCCGGAGTTGCCGGTGCCGCTCTTGCTCAC
ACCCTTGGCAAAGAGGGGCGTCGTGTAAAAGTAATTGAAAGAGATTTGACAGAGCCTGAT
CGAATTGTTGGAGAACTCCTACAACCAGGTGGCTTCCTCAAATTGCAGGAGTTGGGTTTG
GAAGATTGTGTGGAGAATATTGATGCTCAGCGAGTGTTTGGGTATGCTCTTTTCAAGGAT
GGCAAGAGCACTCGTCTTTCTTATCCCCTGGAGAAATTTCACGCTGAGGTTTCTGGAAGG
AGCTTTCACAATGGGCGTTTCATTCAAAGAATGCGAGAGAAAGCTGCATCTCTTCCCAAT
GTCAAACTGGAGCAAGGCACTGTTACGTCTCTGCTTGAAGAAAACGGGACCATTAGAGGT
GTTCAGTACAAAAACAAATCTGGCGAAGAGTTGAAAGCCTATGCACCATTGACCATAGTA
TGTGATGGTTGTTTCTCAAATCTACGGCGTACCCTTTGCGACCCAAAGGTAGAAGTGCCT
TCCTGTTTTGTTGGTCTGGTCCTGGAGAACTGCCAGCTTCCACATGCAAACCATGGACAT
GTCATTTTGGCTGATCCATCACCTATCTTGTTCTATCCCATAAGCAGTACCGAGGTCCGC
TGTCTGGTTGATGTACCTGGTCAAAAAGTGCCTTCTATTTCAAATGGTGAAATGGGCAAA
TATTTGAAAAGCATCGTTGCTCCCCAGGTCCCTCCTGAGATAAAAGATGCATTCATTGCC
GCAATTGATAAAGGTAACATCAGGACAATGCCAAACCGAAGCATGCCAGCTGCTCCTCAT
CCAACTCCTGGTGCTCTTCTCATGGGAGATGCATTCAATATGCGTCATCCCTTGACTGGT
GGAGGAATGACTGTAGCATTGTCTGATATTGTTGTATTACGTGATCTTCTTAAACCTCTT
CGTGATTTGAATGATGCACCTACACTTTGTAGATATCTGGAGTCCTTTTACACCTTGCGT
AAGCCTGTGGCATCCACCATAAATACATTGGCTGGTGCCTTGTATAAGGTGTTTTGTGCT
TCACCTGATCAAGCTAGGAAGGAAATGCGCGATGCATGCTTTGACTATTTGAGCCTCGGT
GGAGTATTCTCAACAGGACCAGTATCTTTGCTTTCTGGCTTAAACCCTCGTCCATTAAGC
CTTGTTTGTCATTTCTTTGCTGTGGCAATCTATGGTGTTGGCCGCTTGCTGCTGCCTTTC
CCATCACCCAAACGTATGTGGATTGGAGCCCGGCTGATATCGGGTGCATCTGGAATCATT
TTCCCGATCATCAAAGCAGAAGGAGTGAGGCAGATGTTCTTCCCTGCTACTGTTCCTGCA
TATTACAGGTCTCCTCCTGAAGTGAAATTGTAA

Peptide Sequence

PEP ID

XP_016446677.1
PEP Infomation

PREDICTED: squalene monooxygenase-like [Nicotiana tabacum]
Sequence

MVDMGLSGSVLAVVFGFVAVLWFFIQRNGGRKDKNNDPATATTSTTTTTVYDGECRSKDA
NDNADIIIVGAGVAGAALAHTLGKEGRRVKVIERDLTEPDRIVGELLQPGGFLKLQELGL
EDCVENIDAQRVFGYALFKDGKSTRLSYPLEKFHAEVSGRSFHNGRFIQRMREKAASLPN
VKLEQGTVTSLLEENGTIRGVQYKNKSGEELKAYAPLTIVCDGCFSNLRRTLCDPKVEVP
SCFVGLVLENCQLPHANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMGK
YLKSIVAPQVPPEIKDAFIAAIDKGNIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTG
GGMTVALSDIVVLRDLLKPLRDLNDAPTLCRYLESFYTLRKPVASTINTLAGALYKVFCA
SPDQARKEMRDACFDYLSLGGVFSTGPVSLLSGLNPRPLSLVCHFFAVAIYGVGRLLLPF
PSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATVPAYYRSPPEVKL

Transcript Sequence

Gene sequence data has not been registered.